Directory
| Name | Short Description | Topic | Type | Protocol |
|---|---|---|---|---|
| Name | Short Description | Topic | Type | Protocol |
| acromine | Search for distinct expanded forms of acronyms from MEDLINE. Based on your location, you may need to request access to [...] |
General | Text Mining | SOAP |
| applyCRFService | Named Entity Recognition based on Conditional Random Fields method (Machine Learning). This service can be used to extract protein names [...] |
General | Named Entity Recognition | SOAP |
| Article section text classifier | This service provides 2 operations that can be used to classify a piece of text into one of the standard [...] |
General | Text Mining | SOAP |
| Auto-Complete Neuroscience Terms | Search terms starting for the query used for auto-complete service. |
Biology, General | Named Entity Recognition, Ontology, Ontology Lookup | REST |
| BridgeRest | Identifier mapping service for genes and proteins from multiple species, and for metabolites. Can translate single identifiers, batches of identifiers, [...] |
Biology, General, Microarrays | Analysis, Identifier, Named Entity Recognition | REST |
| citedin | Citedin finds where you are cited! Some of your papers may have been mentioned where you didn’t expect that to [...] |
Biology, General | Document Discovery, Identifier, Literature | REST |
| CRONOS: the cross-reference navigation server | MOTIVATION: Cross-mapping of gene and protein identifiers between different databases is a tedious and time-consuming task. To overcome this, we [...] |
General | Text Mining | SOAP |
| eUtils | Entrez Programming Utilities are tools that provide access to Entrez data outside of the regular web query interface and may [...] |
Biology, General | Data Retrieval, Document Discovery, Identifier, Literature | SOAP |
| GoPubMedTermGeneration | This service takes in a document containg text and extracts all scientific terms. These terms represent a profile for the [...] |
Biology, General | Literature, Text Mining | SOAP |
| iHOP web services | — “”: |
General | Text Mining | SOAP |
| iHOP_SOAP-document-literal | — “”: |
Biology, General | Literature, Text Mining | SOAP |
| iHOP_SOAP-rpc-literal | — “”: |
Biology, General | Literature, Text Mining | SOAP |
| MRS Text Search and Sequence Retrieval | MRS is a service that provides text search and retrieval services on many large databanks including UniProt and EMBL. The [...] |
General | Document Discovery, Document Similarity, Named Entity Recognition, Text Mining | SOAP |
| PDF to text | This service will extract the text content from a PDF file. It uses the pdftotext executable from Xpdf (http://www.foolabs.com/xpdf/). The [...] |
General | Text Mining | SOAP |
| Search MIRIAM annotations | Search for MIRIAM URNs that can be used for annotation. Return formats are human, json and xml. Please read our [...] |
Biology, General | Named Entity Recognition, Ontology Lookup, System Engineering | REST |
| SearcherWSService | With this service one can retrieve (references to) documents from a Lucene index, such as from MedLine. Use http://ws.adaptivedisclosure.org/axis/services/getIndexes?wsdl > [...] |
Biology, General | Literature, Text Mining | SOAP |
| Sentence Annotator | This is a simple Sentence Splitter service. It is a UIMA applications that uses the Apache SimpleServer that makes results [...] |
General | Text Mining | REST |
| Sentence splitter service | This service accepts a text string and will attempt to split it into sentences. The sentences are returned as an [...] |
General | Text Mining | SOAP |
| termine | Input some source text and retrieve a list of terms discovered, ranked by their importance within the text. |
General | Text Mining | SOAP |
| TexFlame | TexFlame renders a single PubMed abstract into a graphical representation derived from the Systems Biology Graphical Notation (SBGN). The graph [...] |
General | Text Mining | REST |
